Quantifying collective interactions in biomolecular phase separation

Research output: Contribution to journalResearch articleContributedpeer-review

Contributors

  • Hannes Ausserwöger - , University of Cambridge (Author)
  • Ella de Csilléry - , University of Cambridge (Author)
  • Daoyuan Qian - , University of Cambridge (Author)
  • Georg Krainer - , University of Graz (Author)
  • Timothy J Welsh - , University of Cambridge (Author)
  • Tomas Sneideris - , University of Cambridge (Author)
  • Titus M Franzmann - , Chair of Cellular Biochemistry, Center for Molecular and Cellular Bioengineering (CMCB) (Author)
  • Seema Qamar - , University of Cambridge (Author)
  • Nadia A Erkamp - , University of Cambridge (Author)
  • Jonathon Nixon-Abell - , University of Cambridge (Author)
  • Mrityunjoy Kar - , Max Planck Institute of Molecular Cell Biology and Genetics (Author)
  • Peter St George-Hyslop - , Columbia University (Author)
  • Anthony A Hyman - , Max Planck Institute of Molecular Cell Biology and Genetics (Author)
  • Simon Alberti - , Chair of Cellular Biochemistry (Author)
  • Rohit V Pappu - , Washington University St. Louis (Author)
  • Tuomas P J Knowles - , University of Cambridge (Author)

Abstract

Biomolecular phase separation is an emerging theme for protein assembly and cellular organisation. The collective forces driving such condensation, however, remain challenging to characterise. Here we show that tracking the dilute phase concentration of only one component suffices to quantify composition and energetics of multicomponent condensates. Applying this assay to several disease- and stress-related proteins, we find that monovalent ions can either deplete from or enrich within the dense phase in a context-dependent manner. By analysing the effect of the widely used modulator 1,6-hexanediol, we find that the compound inhibits phase separation by acting as a solvation agent that expands polypeptide chains. Extending the strategy to in cellulo data, we even quantify the relative energetic contributions of individual proteins within complex condensates. Together, our approach provides a generic and broadly applicable tool for dissecting the forces governing biomolecular condensation and guiding the rational modulation of condensate behaviour.

Details

Original languageEnglish
Article number7724
JournalNature communications
Volume16
Issue number1
Publication statusPublished - 19 Aug 2025
Peer-reviewedYes

External IDs

PubMedCentral PMC12365266
Scopus 105013558550
ORCID /0000-0003-4017-6505/work/191040360
ORCID /0000-0002-4281-7209/work/196680206

Keywords

Keywords

  • Biomolecular Condensates/chemistry, Humans, Phase Transition, Proteins/chemistry, Phase Separation