Kidney edge detection in laparoscopic image data for computer-assisted surgery: Kidney edge detection

Research output: Contribution to journalResearch articleContributedpeer-review

Contributors

  • Georges Hattab - , National Center for Tumor Diseases (NCT) Dresden (Author)
  • Marvin Arnold - , National Center for Tumor Diseases (NCT) Dresden (Author)
  • Leon Strenger - , National Center for Tumor Diseases (NCT) Dresden (Author)
  • Max Allan - , Intuitive Surgical (Author)
  • Darja Arsentjeva - , National Center for Tumor Diseases (NCT) Dresden (Author)
  • Oliver Gold - , National Center for Tumor Diseases (NCT) Dresden (Author)
  • Tobias Simpfendörfer - , Heidelberg University  (Author)
  • Lena Maier-Hein - , German Cancer Research Center (DKFZ) (Author)
  • Stefanie Speidel - , National Center for Tumor Diseases Dresden (Author)

Abstract

Purpose: In robotic-assisted kidney surgery, computational methods make it possible to augment the surgical scene and potentially improve patient outcome. Most often, soft-tissue registration is a prerequisite for the visualization of tumors and vascular structures hidden beneath the surface. State-of-the-art volume-to-surface registration methods, however, are computationally demanding and require a sufficiently large target surface. To overcome this limitation, the first step toward registration is the extraction of the outer edge of the kidney. Methods: To tackle this task, we propose a deep learning-based solution. Rather than working only on the raw laparoscopic images, the network is given depth information and distance fields to predict whether a pixel of the image belongs to an edge. We evaluate our method on expert-labeled in vivo data from the EndoVis sub-challenge 2017 Kidney Boundary Detection and define the current state of the art. Results: By using a leave-one-out cross-validation, we report results for the most suitable network with a median precision-like, recall-like, and intersection over union (IOU) of 39.5 px, 143.3 px, and 0.3, respectively. Conclusion: We conclude that our approach succeeds in predicting the edges of the kidney, except in instances where high occlusion occurs, which explains the average decrease in the IOU score. All source code, reference data, models, and evaluation results are openly available for download: https://github.com/ghattab/kidney-edge-detection/.

Details

Original languageEnglish
Pages (from-to)379-387
Number of pages9
JournalInternational journal of computer assisted radiology and surgery
Volume15
Issue number3
Publication statusPublished - 1 Mar 2020
Peer-reviewedYes

External IDs

PubMed 31828502
ORCID /0000-0002-4590-1908/work/163294068