Identification and characterization of a BRAF fusion oncoprotein with retained autoinhibitory domains

Research output: Contribution to journalResearch articleContributedpeer-review

Contributors

  • Florian Weinberg - , University of Freiburg (Author)
  • Ricarda Griffin - , University of Freiburg (Author)
  • Martina Fröhlich - , German Cancer Research Center (DKFZ) (Author)
  • Christoph Heining - , National Center for Tumor Diseases Dresden, German Cancer Consortium (Partner: DKTK, DKFZ), National Center for Tumor Diseases (NCT) Heidelberg, German Cancer Research Center (DKFZ), University Hospital Carl Gustav Carus Dresden (Author)
  • Sandra Braun - , University of Freiburg (Author)
  • Corinna Spohr - , University of Freiburg (Author)
  • Mary Iconomou - , University of Freiburg (Author)
  • Viola Hollek - , University of Freiburg (Author)
  • Michael Röring - , University of Freiburg (Author)
  • Peter Horak - , German Cancer Research Center (DKFZ), German Cancer Consortium (DKTK) Core Center Heidelberg (Author)
  • Simon Kreutzfeldt - , German Cancer Research Center (DKFZ), German Cancer Consortium (DKTK) Core Center Heidelberg (Author)
  • Gregor Warsow - , German Cancer Research Center (DKFZ) (Author)
  • Barbara Hutter - , German Cancer Research Center (DKFZ) (Author)
  • Sebastian Uhrig - , German Cancer Research Center (DKFZ), Heidelberg University  (Author)
  • Olaf Neumann - , German Cancer Consortium (DKTK) Core Center Heidelberg, Heidelberg University  (Author)
  • David Reuss - , German Cancer Consortium (DKTK) Core Center Heidelberg, Heidelberg University , German Cancer Research Center (DKFZ) (Author)
  • Dieter Henrik Heiland - , University Medical Center Freiburg (Author)
  • Christof von Kalle - , German Cancer Research Center (DKFZ) (Author)
  • Wilko Weichert - , Technical University of Munich, German Cancer Consortium (DKTK) partner site Munich (Author)
  • Albrecht Stenzinger - , German Cancer Consortium (DKTK) Core Center Heidelberg, Heidelberg University  (Author)
  • Benedikt Brors - , German Cancer Research Center (DKFZ), German Cancer Consortium (DKTK) Core Center Heidelberg (Author)
  • Hanno Glimm - , National Center for Tumor Diseases Dresden, German Cancer Consortium (Partner: DKTK, DKFZ), National Center for Tumor Diseases (NCT) Heidelberg, German Cancer Research Center (DKFZ), University Hospital Carl Gustav Carus Dresden (Author)
  • Stefan Fröhling - , German Cancer Research Center (DKFZ), German Cancer Consortium (DKTK) Core Center Heidelberg (Author)
  • Tilman Brummer - , University of Freiburg, German Cancer Research Center (DKFZ) (Author)

Abstract

Fusion proteins involving the BRAF serine/threonine kinase occur in many cancers. The oncogenic potential of BRAF fusions has been attributed to the loss of critical N-terminal domains that mediate BRAF autoinhibition. We used whole-exome and RNA sequencing in a patient with glioblastoma multiforme to identify a rearrangement between TTYH3, encoding a membrane-resident, calcium-activated chloride channel, and BRAF intron 1, resulting in a TTYH3–BRAF fusion protein that retained all features essential for BRAF autoinhibition. Accordingly, the BRAF moiety of the fusion protein alone, which represents full-length BRAF without the amino acids encoded by exon 1 (BRAFΔE1), did not induce MEK/ERK phosphorylation or transformation. Likewise, neither the TTYH3 moiety of the fusion protein nor full-length TTYH3 provoked ERK pathway activity or transformation. In contrast, TTYH3–BRAF displayed increased MEK phosphorylation potential and transforming activity, which were caused by TTYH3-mediated tethering of near-full-length BRAF to the (endo)membrane system. Consistent with this mechanism, a synthetic approach, in which BRAFΔE1 was tethered to the membrane by fusing it to the cytoplasmic tail of CD8 also induced transformation. Furthermore, we demonstrate that TTYH3–BRAF signals largely independent of a functional RAS binding domain, but requires an intact BRAF dimer interface and activation loop phosphorylation sites. Cells expressing TTYH3–BRAF exhibited increased MEK/ERK signaling, which was blocked by clinically achievable concentrations of sorafenib, trametinib, and the paradox breaker PLX8394. These data provide the first example of a fully autoinhibited BRAF protein whose oncogenic potential is dictated by a distinct fusion partner and not by a structural change in BRAF itself.

Details

Original languageEnglish
Pages (from-to)814-832
Number of pages19
JournalOncogene
Volume39
Issue number4
Publication statusPublished - 23 Jan 2020
Peer-reviewedYes

External IDs

PubMed 31558800

Keywords

Sustainable Development Goals