Concordant inter-laboratory derived concentrations of ceramides in human plasma reference materials via authentic standards

Research output: Contribution to journalResearch articleContributedpeer-review

Contributors

  • Federico Torta - , Duke-NUS Medical School (Author)
  • Nils Hoffmann - , Chair of Waste Management and Circular Economy, Jülich Research Centre, University of Vienna (Author)
  • Bo Burla - , National University of Singapore (Author)
  • Irina Alecu - , Neural Regeneration Laboratory, Ottawa Institute of Systems Biology, Ottawa Brain and Mind Research Institute, Department of Biochemistry, Microbiology, and Immunology, and Department of Chemistry, Centre for Catalysis Research and Innovation, University of Ottawa, Ottawa, K1H 8M5, Canada. (Author)
  • Makoto Arita - , Yokohama City University (Author)
  • Takeshi Bamba - , Kyushu University (Author)
  • Steffany A L Bennett - , Neural Regeneration Laboratory, Ottawa Institute of Systems Biology, Ottawa Brain and Mind Research Institute, Department of Biochemistry, Microbiology, and Immunology, and Department of Chemistry, Centre for Catalysis Research and Innovation, University of Ottawa, Ottawa, K1H 8M5, Canada. (Author)
  • Justine Bertrand-Michel - , MetaboHUB-Metatoul (Author)
  • Britta Brügger - , Heidelberg University  (Author)
  • Mónica P Cala - , Universidad de los Andes Colombia (Author)
  • Dolores Camacho-Muñoz - , Manchester Academic Health Science Centre (Author)
  • Antonio Checa - , Karolinska Institutet (Author)
  • Michael Chen - , University of British Columbia (Author)
  • Michaela Chocholoušková - , University of Pardubice (Author)
  • Michelle Cinel - , La Trobe University (Author)
  • Emeline Chu-Van - , Université Paris-Saclay (Author)
  • Benoit Colsch - , Université Paris-Saclay (Author)
  • Cristina Coman - , University of Vienna (Author)
  • Lisa Connell - , Avanti Research (Author)
  • Bebiana C Sousa - , Babraham Institute (Author)
  • Alex M Dickens - , University of Turku (Author)
  • Maria Fedorova - , Center of Membrane Biochemistry and Lipid Research, Leipzig University (Author)
  • Finnur Freyr Eiríksson - , ArcticMass (Author)
  • Hector Gallart-Ayala - , University of Lausanne (Author)
  • Mohan Ghorasaini - , Leiden University Medical Centre (LUMC) (Author)
  • Martin Giera - , Leiden University Medical Centre (LUMC) (Author)
  • Xue Li Guan - , Nanyang Technological University (Author)
  • Mark Haid - , Helmholtz Zentrum München - German Research Center for Environmental Health (Author)
  • Thomas Hankemeier - , Leiden University (Author)
  • Amy Harms - , Leiden University (Author)
  • Marcus Höring - , University Hospital Regensburg (Author)
  • Michal Holčapek - , University of Pardubice (Author)
  • Thorsten Hornemann - , University of Zurich (Author)
  • Chunxiu Hu - , CAS - Dalian Institute of Chemical Physics (Author)
  • Andreas J Hülsmeier - , University of Zurich (Author)
  • Kevin Huynh - , La Trobe University (Author)
  • Christina M Jones - , National Institute of Standards and Technology (NIST) (Author)
  • Julijana Ivanisevic - , University of Lausanne (Author)
  • Yoshihiro Izumi - , Kyushu University (Author)
  • Harald C Köfeler - , Medical University of Graz (Author)
  • Sin Man Lam - , CAS - Institute of Genetics and Developmental Biology (Author)
  • Mike Lange - , Leipzig University (Author)
  • Jong Cheol Lee - , Yonsei University (Author)
  • Gerhard Liebisch - , University Hospital Regensburg (Author)
  • Katrice Lippa - , National Institute of Standards and Technology (NIST) (Author)
  • Andrea F Lopez-Clavijo - , Babraham Institute (Author)
  • Malena Manzi - , National Scientific and Technical Research Council Argentina (CONICET) (Author)
  • Manuela R Martinefski - , Universidad de Buenos Aires (Author)
  • Raviswamy G H Math - , Tata Institute of Fundamental Research (Author)
  • Satyajit Mayor - , Tata Institute of Fundamental Research (Author)
  • Peter J Meikle - , La Trobe University (Author)
  • María Eugenia Monge - , National Scientific and Technical Research Council Argentina (CONICET) (Author)
  • Myeong Hee Moon - , Yonsei University (Author)
  • Sneha Muralidharan - , Tata Institute of Fundamental Research (Author)
  • Anna Nicolaou - , Manchester Academic Health Science Centre (Author)
  • Thao Nguyen-Tran - , Neural Regeneration Laboratory, Ottawa Institute of Systems Biology, Ottawa Brain and Mind Research Institute, Department of Biochemistry, Microbiology, and Immunology, and Department of Chemistry, Centre for Catalysis Research and Innovation, University of Ottawa, Ottawa, K1H 8M5, Canada. (Author)
  • Valerie B O'Donnell - , Cardiff University (Author)
  • Matej Orešič - , Örebro University (Author)
  • Arvind Ramanathan - , Institute for Stem Cell Science and Regenerative Medicine (Author)
  • Fabien Riols - , Helmholtz Zentrum München - German Research Center for Environmental Health (Author)
  • Daisuke Saigusa - , Tohoku University (Author)
  • Tracey B Schock - , National Institute of Standards and Technology, Charleston (Author)
  • Heidi Schwartz-Zimmermann - , University of Natural Resources and Life Sciences, Vienna (Author)
  • Guanghou Shui - , CAS - Institute of Genetics and Developmental Biology (Author)
  • Madhulika Singh - , Leiden University (Author)
  • Masatomo Takahashi - , Kyushu University (Author)
  • Margrét Thorsteinsdóttir - , ArcticMass (Author)
  • Noriyuki Tomiyasu - , Kyushu University (Author)
  • Anthony Tournadre - , MetaboHUB-Metatoul (Author)
  • Hiroshi Tsugawa - , Tokyo University of Agriculture and Technology (Author)
  • Victoria J Tyrrell - , Cardiff University (Author)
  • Grace van der Gugten - , Providence Health Care Canada (Author)
  • Michael O Wakelam - , Babraham Institute (Author)
  • Craig E Wheelock - , Karolinska University Hospital (Author)
  • Denise Wolrab - , University of Pardubice (Author)
  • Guowang Xu - , CAS - Dalian Institute of Chemical Physics (Author)
  • Tianrun Xu - , CAS - Dalian Institute of Chemical Physics (Author)
  • John A Bowden - , University of Florida (Author)
  • Kim Ekroos - , Lipidomics Consulting Ltd. (Author)
  • Robert Ahrends - , University of Vienna (Author)
  • Markus R Wenk - , Hamad bin Khalifa University (Author)

Abstract

In this community effort, we compare measurements between 34 laboratories from 19 countries, utilizing mixtures of labelled authentic synthetic standards, to quantify by mass spectrometry four clinically used ceramide species in the NIST (National Institute of Standards and Technology) human blood plasma Standard Reference Material (SRM) 1950, as well as a set of candidate plasma reference materials (RM 8231). Participants either utilized a provided validated method and/or their method of choice. Mean concentration values, and intra- and inter-laboratory coefficients of variation (CV) were calculated using single-point and multi-point calibrations, respectively. These results are the most precise (intra-laboratory CVs ≤ 4.2%) and concordant (inter-laboratory CVs < 14%) community-derived absolute concentration values reported to date for four clinically used ceramides in the commonly analyzed SRM 1950. We demonstrate that calibration using authentic labelled standards dramatically reduces data variability. Furthermore, we show how the use of shared RM can correct systematic quantitative biases and help in harmonizing lipidomics. Collectively, the results from the present study provide a significant knowledge base for translation of lipidomic technologies to future clinical applications that might require the determination of reference intervals (RIs) in various human populations or might need to estimate reference change values (RCV), when analytical variability is a key factor for recall during multiple testing of individuals.

Details

Original languageEnglish
Article number8562
Pages (from-to)8562
JournalNature communications
Volume15
Issue number1
Publication statusPublished - 3 Oct 2024
Peer-reviewedYes

External IDs

PubMedCentral PMC11449902
Scopus 85205605136
ORCID /0000-0002-4692-3885/work/200630961

Keywords

Keywords

  • Humans, Ceramides/blood, Reference Standards, Calibration, Laboratories/standards, Mass Spectrometry/methods, Lipidomics/methods, Reproducibility of Results