The biology and polymer physics underlying large-scale chromosome organization

Research output: Contribution to journalReview articleContributedpeer-review

Contributors

  • Shelley Sazer - , Baylor College of Medicine (Author)
  • Helmut Schiessel - , Leiden University (Author)

Abstract

Chromosome large-scale organization is a beautiful example of the interplay between physics and biology. DNA molecules are polymers and thus belong to the class of molecules for which physicists have developed models and formulated testable hypotheses to understand their arrangement and dynamic properties in solution, based on the principles of polymer physics. Biologists documented and discovered the biochemical basis for the structure, function and dynamic spatial organization of chromosomes in cells. The underlying principles of chromosome organization have recently been revealed in unprecedented detail using high-resolution chromosome capture technology that can simultaneously detect chromosome contact sites throughout the genome. These independent lines of investigation have now converged on a model in which DNA loops, generated by the loop extrusion mechanism, are the basic organizational and functional units of the chromosome.

Details

Original languageEnglish
Pages (from-to)87-104
Number of pages18
JournalTraffic
Volume19
Issue number2
Publication statusPublished - Feb 2018
Peer-reviewedYes
Externally publishedYes

External IDs

PubMed 29105235

Keywords

Keywords

  • chromosome evolution, chromosome territory, chromosome tethering, cohesin, fractal globule, Hi-C, loop extrusion, polymer physics, SMC, topologically associated domains