Climate change and land-use intensification are threatening soil communities and ecosystem functions. Understanding the combined effects of climate change and land use is crucial for predicting future impacts on soil biodiversity and ecosystem functioning in agroecosystems. Here, we used a field experiment to quantify the combined effects of climate change (warming and altered precipitation patterns) and land use (agricultural type and management intensity) on soil food webs across nematodes, micro-, and macroarthropods. Specifically, we investigated two types of agricultural systems—croplands and grasslands—under both high- and low-intensity management. We focused on assessing the functioning of soil food webs by investigating changes in energy flux to consumers in the main trophic groups: decomposers, microbivores, herbivores, and predators. While the total energy flux and detritivory, herbivory and predation in the soil food web remained unchanged across treatments, low-intensity land use—compared to high intensity—led to higher microbivory and microbial control under future climate conditions (i.e., warming and summer drought) in croplands and grasslands. At the same time, microbial and herbivore control were higher under low-intensity land use in croplands and grasslands. Overall, our results underscore the potential benefits of less intensive, more sustainable management practices for soil food-web functioning under current and future climate scenarios.