Structures of the PSCD domains of pleuralin-1, a biosilica-associated protein from the diatom Cylindrotheca fusiformis, and their interactions with other cell wall proteins: NMR Structures and Interactions with Other Biosilica-Associated Proteins

Research output: Contribution to journalResearch articleContributedpeer-review

Contributors

  • Silvia De Sanctis - , University of Regensburg (Author)
  • Michael Wenzler - , University of Regensburg, Bruker Corporation (Author)
  • Nils Kröger - , Faculty of Chemistry and Food Chemistry, Center for Molecular Bioengineering (B CUBE), University of Regensburg (Author)
  • Wilhelm M M. Malloni - , University of Regensburg (Author)
  • Manfred Sumper - , University of Regensburg (Author)
  • Rainer Deutzmann - , University of Regensburg (Author)
  • Patrick Zadravec - , University of Regensburg (Author)
  • Eike Brunner - , Chair of Bioanalytical Chemistry, University of Regensburg (Author)
  • Werner Kremer - , University of Regensburg (Author)
  • Hans Robert R. Kalbitzer - , University of Regensburg (Author)

Abstract

Diatoms are eukaryotic unicellular algae characterized by silica cell walls and associated with three unique protein families, the pleuralins, frustulins, and silaffins. The NMR structure of the PSCD4 domain of pleuralin-1 from Cylindrotheca fusiformis contains only three short helical elements and is stabilized by five unique disulfide bridges. PSCD4 contains two binding sites for Ca2+ ions with millimolar affinity. NMR-based interaction studies show an interaction of the domain with native silaffin-1A as well as with α-frustulins. The interaction sites of the two proteins mapped on the PSCD4 structure are contiguous and show only a small overlap. A plausible functional role of pleuralin could be to bind simultaneously silaffin-1A located inside the cell wall and α-frustulin coating the cell wall, thus connecting the interfaces between hypotheca and epitheca at the girdle bands. Restrained molecular dynamics calculations suggest a bead-chain-like structure of the central part of pleuralin-1.

Details

Original languageEnglish
Pages (from-to)1178-1191
Number of pages14
JournalStructure
Volume24
Issue number7
Publication statusPublished - 6 Jul 2016
Peer-reviewedYes

External IDs

PubMed 27320836