pH-dependent interactions guide the folding and gate the transmembrane pore of the β-barrel membrane protein OmpG

Research output: Contribution to journalResearch articleContributedpeer-review

Contributors

  • Mehdi Damaghi - (Author)
  • Christian Bippes - (Author)
  • Stefan Köster - (Author)
  • Özkan Yildiz - (Author)
  • Stefania A. Mari - (Author)
  • Werner Kühlbrandt - (Author)
  • Daniel J. Muller - , TUD Dresden University of Technology (Author)

Abstract

The physical interactions that switch the functional state of membrane proteins are poorly understood. Previously, the pH-gating conformations of the β-barrel forming outer membrane protein G (OmpG) from Escherichia coli have been solved. When the pH changes from neutral to acidic the flexible extracellular loop L6 folds into and closes the OmpG pore. Here, we used single-molecule force spectroscopy to structurally localize and quantify the interactions that are associated with the pH-dependent closure. At acidic pH, we detected a pH-dependent interaction at loop L6. This interaction changed the (un)folding of loop L6 and of β-strands 11 and 12, which connect loop L6. All other interactions detected within OmpG were unaffected by changes in pH. These results provide a quantitative and mechanistic explanation of how pH-dependent interactions change the folding of a peptide loop to gate the transmembrane pore. They further demonstrate how the stability of OmpG is optimized so that pH changes modify only those interactions necessary to gate the transmembrane pore.

Details

Original languageEnglish
Pages (from-to)878-882
Number of pages5
JournalJournal of Molecular Biology
Volume397
Issue number4
Publication statusPublished - Apr 2010
Peer-reviewedYes
Externally publishedYes

External IDs

PubMed 20171227

Keywords

Keywords

  • Escherichia coli, Molecular interactions, PH gating, Unfolding, β-barrel membrane protein