Opposing Effects of Glutamine and Asparagine Govern Prion Formation by Intrinsically Disordered Proteins

Research output: Contribution to journalResearch articleContributedpeer-review

Contributors

  • Randal Halfmann - , Whitehead Institute for Biomedical Research, Massachusetts Institute of Technology (MIT) (Author)
  • Simon Alberti - , Whitehead Institute for Biomedical Research (Author)
  • Rajaraman Krishnan - , Whitehead Institute for Biomedical Research (Author)
  • Nicholas Lyle - , Washington University St. Louis (Author)
  • Charles W. O'Donnell - , Whitehead Institute for Biomedical Research, Massachusetts Institute of Technology (MIT) (Author)
  • Oliver D. King - , Boston Biomedical Research Institute (Author)
  • Bonnie Berger - , Massachusetts Institute of Technology (MIT) (Author)
  • Rohit V. Pappu - , Washington University St. Louis (Author)
  • Susan Lindquist - , Whitehead Institute for Biomedical Research, Massachusetts Institute of Technology (MIT) (Author)

Abstract

Sequences rich in glutamine (Q) and asparagine (N) residues often fail to fold at the monomer level. This, coupled to their unusual hydrogen-bonding abilities, provides the driving force to switch between disordered monomers and amyloids. Such transitions govern processes as diverse as human protein-folding diseases, bacterial biofilm assembly, and the inheritance of yeast prions (protein-based genetic elements). A systematic survey of prion-forming domains suggested that Q and N residues have distinct effects on amyloid formation. Here, we use cell biological, biochemical, and computational techniques to compare Q/N-rich protein variants, replacing Ns with Qs and Qs with Ns. We find that the two residues have strong and opposing effects: N richness promotes assembly of benign self-templating amyloids; Q richness promotes formation of toxic nonamyloid conformers. Molecular simulations focusing on intrinsic folding differences between Qs and Ns suggest that their different behaviors are due to the enhanced turn-forming propensity of Ns over Qs.

Details

Original languageEnglish
Pages (from-to)72-84
Number of pages13
JournalMolecular cell
Volume43
Issue number1
Publication statusPublished - 8 Jul 2011
Peer-reviewedYes
Externally publishedYes

External IDs

PubMed 21726811
ORCID /0000-0003-4017-6505/work/161409870

Keywords

Sustainable Development Goals

ASJC Scopus subject areas