Multiplexing genetic and nucleosome positioning codes: A computational approach
Research output: Contribution to journal › Research article › Contributed › peer-review
Contributors
Abstract
Eukaryotic DNA is strongly bent inside fundamental packaging units: the nucleosomes. It is known that their positions are strongly influenced by the mechanical properties of the underlying DNA sequence. Here we discuss the possibility that these mechanical properties and the concomitant nucleosome positions are not just a side product of the given DNA sequence, e.g. that of the genes, but that a mechanical evolution of DNA molecules might have taken place. We first demonstrate the possibility of multiplexing classical and mechanical genetic information using a computational nucleosome model. In a second step we give evidence for genome-wide multiplexing in Saccharomyces cerevisiae and Schizosacharomyces pombe. This suggests that the exact positions of nucleosomes play crucial roles in chromatin function.
Details
Original language | English |
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Article number | e0156905 |
Journal | PloS one |
Volume | 11 |
Issue number | 6 |
Publication status | Published - 1 Jun 2016 |
Peer-reviewed | Yes |
Externally published | Yes |
External IDs
PubMed | 27272176 |
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