Hexameric helicase G40P unwinds DNA in single base pair steps

Research output: Contribution to journalResearch articleContributedpeer-review

Contributors

  • Michael Schlierf - , Chair of Molecular Biophysics, University of Illinois at Urbana-Champaign (Author)
  • Ganggang Wang - , University of Southern California (Author)
  • Xiaojiang S. Chen - , University of Southern California (Author)
  • Taekjip Ha - , Johns Hopkins University (Author)

Abstract

Most replicative helicases are hexameric, ring-shaped motor proteins that translocate on and unwind DNA. Despite extensive biochemical and structural investigations, how their translocation activity is utilized chemo-mechanically in DNA unwinding is poorly understood. We examined DNA unwinding by G40P, a DnaB-family helicase, using a single-molecule fluorescence assay with a single base pair resolution. The high-resolution assay revealed that G40P by itself is a very weak helicase that stalls at barriers as small as a single GC base pair and unwinds DNA with the step size of a single base pair. Binding of a single ATP g S could stall unwinding, demonstrating highly coordinated ATP hydrolysis between six identical subunits. We observed frequent slippage of the helicase, which is fully suppressed by the primase DnaG. We anticipate that these findings allow a better understanding on the fine balance of thermal fluctuation activation and energy derived from hydrolysis.

Details

Original languageEnglish
Article number42001
Number of pages17
JournaleLife
Volume8
Publication statusPublished - 28 Jan 2019
Peer-reviewedYes

External IDs

Scopus 85061283515
ORCID /0000-0002-6209-2364/work/142237627

Keywords

Keywords

  • REPLICATIVE HELICASE, MECHANISM, MOLECULE, PROTEIN, HYDROLYSIS, REVEALS, ATP, MECHANOCHEMISTRY, TRANSLOCATION, SPECIFICITY