Genomic evidence for the widespread presence of GH45 cellulases among soil invertebrates

Research output: Contribution to journalResearch articleContributedpeer-review

Contributors

  • Hannah Muelbaier - , Goethe University Frankfurt a.M., LOEWE Centre for Translational Biodiversity Genomics (LOEWE-TBG) (Author)
  • Freya Arthen - , Goethe University Frankfurt a.M., LOEWE Centre for Translational Biodiversity Genomics (LOEWE-TBG) (Author)
  • Gemma Collins - , LOEWE Centre for Translational Biodiversity Genomics (LOEWE-TBG), Manaaki Whenua - Landcare Research (Author)
  • Thomas Hickler - , Senckenberg Biodiversity and Climate Research Centre, Goethe University Frankfurt a.M. (Author)
  • Karin Hohberg - , Senckenberg Museum of Natural History Görlitz (Author)
  • Ricarda Lehmitz - , LOEWE Centre for Translational Biodiversity Genomics (LOEWE-TBG), Senckenberg Museum of Natural History Görlitz (Author)
  • Yannick Pauchet - , Max Planck Institute for Chemical Ecology (Author)
  • Markus Pfenninger - , LOEWE Centre for Translational Biodiversity Genomics (LOEWE-TBG), Senckenberg Biodiversity and Climate Research Centre, Johannes Gutenberg University Mainz (Author)
  • Anton Potapov - , Chair of Functional Soil Biodiversity Research (gB/SMNG), Senckenberg Museum of Natural History Görlitz, German Centre for Integrative Biodiversity Research (iDiv) Halle—Jena—Leipzig (Author)
  • Juliane Romahn - , LOEWE Centre for Translational Biodiversity Genomics (LOEWE-TBG), Senckenberg Biodiversity and Climate Research Centre, Justus Liebig University Giessen (Author)
  • Ina Schaefer - , LOEWE Centre for Translational Biodiversity Genomics (LOEWE-TBG), Senckenberg Biodiversity and Climate Research Centre, University of Göttingen (Author)
  • Stefan Scheu - , University of Göttingen (Author)
  • Clément Schneider - , LOEWE Centre for Translational Biodiversity Genomics (LOEWE-TBG), Senckenberg Museum of Natural History Görlitz (Author)
  • Ingo Ebersberger - , Goethe University Frankfurt a.M., LOEWE Centre for Translational Biodiversity Genomics (LOEWE-TBG), Senckenberg Biodiversity and Climate Research Centre (Author)
  • Miklós Bálint - , LOEWE Centre for Translational Biodiversity Genomics (LOEWE-TBG), Senckenberg Biodiversity and Climate Research Centre, Justus Liebig University Giessen (Author)

Abstract

Lignocellulose is a major component of vascular plant biomass. Its decomposition is crucial for the terrestrial carbon cycle. Microorganisms are considered primary decomposers, but evidence increases that some invertebrates may also decompose lignocellulose. We investigated the taxonomic distribution and evolutionary origins of GH45 hydrolases, important enzymes for the decomposition of cellulose and hemicellulose, in a collection of soil invertebrate genomes. We found that these genes are common in springtails and oribatid mites. Phylogenetic analysis revealed that cellulase genes were acquired early in the evolutionary history of these groups. Domain architectures and predicted 3D enzyme structures indicate that these cellulases are functional. Patterns of presence and absence of these genes across different lineages prompt further investigation into their evolutionary and ecological benefits. The ubiquity of cellulase genes suggests that soil invertebrates may play a role in lignocellulose decomposition, independently or in synergy with microorganisms. Understanding the ecological and evolutionary implications might be crucial for understanding soil food webs and the carbon cycle.

Details

Original languageEnglish
Article numbere17351
Number of pages12
JournalMolecular ecology
Volume33
Issue number20
Publication statusPublished - Oct 2024
Peer-reviewedYes

External IDs

PubMed 38712904

Keywords

Keywords

  • arthropods, comparative genomics, decomposition, global change, horizontal gene transfer