Finite-time Lyapunov exponents and metabolic control coefficients for threshold detection of stimulus-response curves

Research output: Contribution to journalResearch articleContributedpeer-review

Contributors

  • Luu Hoang Duc - , Max Planck Institute for Mathematics in the Sciences, VAST - Institute of Mathematics (Author)
  • Joseph Páez Chávez - , TUD Dresden University of Technology, Escuela Superior Politécnica del Litoral (Author)
  • Doan Thai Son - , VAST - Institute of Mathematics (Author)
  • Stefan Siegmund - , Chair of Dynamics and Control, Center for Dynamics (CfD) (Author)

Abstract

In biochemical networks transient dynamics plays a fundamental role, since the activation of signalling pathways is determined by thresholds encountered during the transition from an initial state (e.g. an initial concentration of a certain protein) to a steady-state. These thresholds can be defined in terms of the inflection points of the stimulus-response curves associated to the activation processes in the biochemical network. In the present work, we present a rigorous discussion as to the suitability of finite-time Lyapunov exponents and metabolic control coefficients for the detection of inflection points of stimulus-response curves with sigmoidal shape.

Details

Original languageEnglish
Pages (from-to)379-394
Number of pages16
JournalJournal of biological dynamics
Volume10
Issue number1
Publication statusPublished - 2016
Peer-reviewedYes

External IDs

PubMed 27416142
ORCID /0000-0003-0967-6747/work/213148717

Keywords

Keywords

  • Finite-time Lyapunov spectrum, Nonautonomous dynamical system, Sigmoidal response curve, Transient dynamics