Defects in Active Nematics - Algorithms for Identification and Tracking

Research output: Contribution to journalResearch articleContributedpeer-review

Contributors

  • Dennis Wenzel - , TUD Dresden University of Technology (Author)
  • Michael Nestler - , TUD Dresden University of Technology (Author)
  • Sebastian Reuther - , TUD Dresden University of Technology (Author)
  • Maximilian Simon - , TUD Dresden University of Technology (Author)
  • Axel Voigt - , TUD Dresden University of Technology, Center for Systems Biology Dresden (CSBD) (Author)

Abstract

The growing interest in active nematics and the emerging evidence of the relevance of topological defects in biology asks for reliable data analysis tools to identify, classify and track such defects in simulation and microscopy data. We here provide such tools and demonstrate on two examples, on an active turbulent state in an active nematodynamic model and on emerging nematic order in a multi-phase field model, the possibility to compare statistical data on defect velocities with experimental results. The considered tools, which are physics based and data driven, are compared with each other.

Details

Original languageEnglish
Pages (from-to)683-692
Number of pages10
JournalComputational methods in applied mathematics
Volume21
Issue number3
Publication statusPublished - 5 Feb 2021
Peer-reviewedYes
Externally publishedYes

Conference

Title7th Sino-German Workshop on Computational and Applied Mathematics
Duration19 - 23 August 2019
CityKiel
CountryGermany

External IDs

Scopus 85109216563

Keywords

Keywords

  • Active Liquid Crystals, Tensor Fields, Topological Defects, Neural Networks, TOPOLOGICAL DEFECTS, CELL, MOTION

Library keywords