Deep learning can predict lymph node status directly from histology in colorectal cancer

Research output: Contribution to journalResearch articleContributedpeer-review

Contributors

  • Lennard Kiehl - , German Cancer Research Center (DKFZ) (Author)
  • Sara Kuntz - , German Cancer Research Center (DKFZ) (Author)
  • Julia Höhn - , German Cancer Research Center (DKFZ) (Author)
  • Tanja Jutzi - , German Cancer Research Center (DKFZ) (Author)
  • Eva Krieghoff-Henning - , German Cancer Research Center (DKFZ) (Author)
  • Jakob N Kather - , Else Kröner Fresenius Center for Digital Health, University Hospital Aachen (Author)
  • Tim Holland-Letz - , German Cancer Research Center (DKFZ) (Author)
  • Annette Kopp-Schneider - , German Cancer Research Center (DKFZ) (Author)
  • Jenny Chang-Claude - , University Hospital Hamburg Eppendorf (Author)
  • Alexander Brobeil - , SRH University of Applied Sciences Heidelberg (Author)
  • Christof von Kalle - , Charité – Universitätsmedizin Berlin (Author)
  • Stefan Fröhling - , National Center for Tumor Diseases (NCT) Heidelberg (Author)
  • Elizabeth Alwers - , German Cancer Research Center (DKFZ) (Author)
  • Hermann Brenner - , German Cancer Research Center (DKFZ) (Author)
  • Michael Hoffmeister - , German Cancer Research Center (DKFZ) (Author)
  • Titus J Brinker - , German Cancer Research Center (DKFZ) (Author)

Abstract

BACKGROUND: Lymph node status is a prognostic marker and strongly influences therapeutic decisions in colorectal cancer (CRC).

OBJECTIVES: The objective of the study is to investigate whether image features extracted by a deep learning model from routine histological slides and/or clinical data can be used to predict CRC lymph node metastasis (LNM).

METHODS: Using histological whole slide images (WSIs) of primary tumours of 2431 patients in the DACHS cohort, we trained a convolutional neural network to predict LNM. In parallel, we used clinical data derived from the same cases in logistic regression analyses. Subsequently, the slide-based artificial intelligence predictor (SBAIP) score was included in the regression. WSIs and data from 582 patients of the TCGA cohort were used as the external test set.

RESULTS: On the internal test set, the SBAIP achieved an area under receiver operating characteristic (AUROC) of 71.0%, the clinical classifier achieved an AUROC of 67.0% and a combination of the two classifiers yielded an improvement to 74.1%. Whereas the clinical classifier's performance remained stable on the TCGA set, performance of the SBAIP dropped to an AUROC of 61.2%. Performance of the clinical classifier depended strongly on the T stage.

CONCLUSION: Deep learning-based image analysis may help predict LNM of patients with CRC using routine histological slides. Combination with clinical data such as T stage might be useful. Strategies to increase performance of the SBAIP on external images should be investigated.

Details

Original languageEnglish
Pages (from-to)464-473
Number of pages10
JournalEuropean journal of cancer
Volume157
Publication statusPublished - Nov 2021
Peer-reviewedYes

External IDs

Scopus 85116653845
ORCID /0000-0002-3730-5348/work/198594430

Keywords

Sustainable Development Goals

Keywords

  • Aged, Aged, 80 and over, Case-Control Studies, Cohort Studies, Colon/pathology, Colorectal Neoplasms/diagnosis, Deep Learning, Female, Humans, Image Processing, Computer-Assisted/methods, Lymph Nodes/pathology, Lymphatic Metastasis/diagnosis, Male, Middle Aged, Neoplasm Staging, Prognosis, ROC Curve, Rectum/pathology