[Contribution of enthalpy to the energetics of complex formation of aromatic ligands with DNA]

Research output: Contribution to journalResearch articleContributedpeer-review

Contributors

Abstract

The energy contributions of electrostatic, van der Waals interactions, hydrogen bonds, and interactions of charge transfer type to the enthalpy of complex formation of the double-stand DNA with the antitumor antibiotics daunomycin, nogalamycin, and novantron, as well as the mutagens ethidium bromide and proflavine have been calculated. According to the calculations, the van der Waals component (except for nogalamycin) is energetically favorable during complex formation of the antibiotics with DNA, and the contributions of H bonds and electrostatic interactions are unfavorable, with the probability of charge transfer in the complexes being low. It has been shown that the relatively low value of the experimental enthalpy of binding is the sum of components greater in absolute value and different in the sign, which is the cause of large errors in estimating the total enthalpy of complex formation of aromatic ligands with DNA.

Details

Original languageRussian
Pages (from-to)642-652
Number of pages11
Journal Biophysics
Volume56
Issue number4
Publication statusPublished - Jul 2011
Peer-reviewedYes

External IDs

PubMed 21950066
ORCID /0000-0002-2335-0260/work/142246470

Keywords

ASJC Scopus subject areas