Computational study of remodeling in a nucleosomal array
Research output: Contribution to journal › Research article › Contributed › peer-review
Contributors
Abstract
Abstract: Chromatin remodeling complexes utilize the energy of ATP hydrolysis to change the packing state of chromatin, e.g. by catalysing the sliding of nucleosomes along DNA. Here we present simple models to describe experimental data of changes in DNA accessibility along a synthetic, repetitive array of nucleosomes during remodeling by the ACF enzyme or its isolated ATPase subunit, ISWI. We find substantial qualitative differences between the remodeling activities of ISWI and ACF. To understand better the observed behavior for the ACF remodeler, we study more microscopic models of nucleosomal arrays. Graphical abstract: [Figure not available: see fulltext.]
Details
Original language | English |
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Article number | 85 |
Journal | European Physical Journal E |
Volume | 38 |
Issue number | 8 |
Publication status | Published - 8 Aug 2015 |
Peer-reviewed | Yes |
Externally published | Yes |
External IDs
PubMed | 26248702 |
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Keywords
ASJC Scopus subject areas
Keywords
- Living systems: Biological Matter