BIO-LGCA: A cellular automaton modelling class for analysing collective cell migration
Research output: Contribution to journal › Research article › Contributed › peer-review
Contributors
Abstract
Collective dynamics in multicellular systems such as biological organs and tissues plays a key role in biological development, regeneration, and pathological conditions. Collective tissue dynamics—understood as population behaviour arising from the interplay of the constituting discrete cells—can be studied with on- and off-lattice agent-based models. However, classical on-lattice agent-based models, also known as cellular automata, fail to replicate key aspects of collective migration, which is a central instance of collective behaviour in multicellular systems. To overcome drawbacks of classical on-lattice models, we introduce an on-lattice, agent-based modelling class for collective cell migration, which we call biological lattice-gas cellular automaton (BIO-LGCA). The BIO-LGCA is characterised by synchronous time updates, and the explicit consideration of individual cell velocities. While rules in classical cellular automata are typically chosen ad hoc, rules for cell-cell and cell-environment interactions in the BIO-LGCA can also be derived from experimental cell migration data or biophysical laws for individual cell migration. We introduce elementary BIO-LGCA models of fundamental cell interactions, which may be combined in a modular fashion to model complex multicellular phenomena. We exemplify the mathematical mean-field analysis of specific BIO-LGCA models, which allows to explain collective behaviour. The first example predicts the formation of clusters in adhesively interacting cells. The second example is based on a novel BIO-LGCA combining adhesive interactions and alignment. For this model, our analysis clarifies the nature of the recently discovered invasion plasticity of breast cancer cells in heterogeneous environments.
Details
Original language | English |
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Article number | e1009066 |
Journal | PLoS Computational Biology |
Volume | 17 |
Issue number | 6 |
Publication status | Published - 15 Jun 2021 |
Peer-reviewed | Yes |
External IDs
Scopus | 85108913665 |
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ORCID | /0000-0001-9955-9012/work/142239121 |
ORCID | /0000-0002-1270-7885/work/142250320 |
Keywords
Keywords
- cellular modelling, cell migration