Bayesian gradient sensing in the presence of rotational diffusion

Research output: Contribution to journalResearch articleContributedpeer-review

Abstract

Biologi cal cells estimate concentration gradients of signaling molecules with a precision that is limited not only by sensing noise, but additionally by the cell's own stochastic motion. We ask for the theoretical limits of gradient estimation in the presence of both motility and sensing noise. We introduce a minimal model of a stationary chemotactic agent in the plane subject to rotational diffusion with rotational diffusion coefficient D. The agent uses Bayesian estimation to optimally infer the gradient direction relative to itself from noisy concentration measurements. Meanwhile, this direction changes on a time-scale 1/D. We show that the optimal effective measurement time, which characterizes the time interval over which past gradient measurements should be averaged to reduce sensing noise, does not scale with the rotational diffusion time 1/D, but with the square root (rD)-1/2, where r is a rate of information gain defined as a signal-to-noise ratio normalized per unit time. This result for gradient sensing parallels a recent result by Mora et al (2019 Phys. Rev. Lett.) for sensing absolute concentration in time-varying environments.

Details

Original languageEnglish
Article number043026
JournalNew journal of physics
Volume23
Issue number4
Publication statusPublished - Apr 2021
Peer-reviewedYes

External IDs

Scopus 85104548504

Keywords

Library keywords