Genotyping-by-sequencing-based high-resolution mapping reveals a single candidate gene for the grapevine veraison locus Ver1

Publikation: Beitrag in FachzeitschriftForschungsartikelBeigetragenBegutachtung

Beitragende

  • Lena Frenzke - , Professur für Botanik (Autor:in)
  • Franco Röckel - , Julius Kühn Institute - Federal Research Centre for Cultivated Plants (Autor:in)
  • Torsten Wenke - , ASGEN GmbH & Co KG (Autor:in)
  • Florian Schwander - , Julius Kühn Institute - Federal Research Centre for Cultivated Plants (Autor:in)
  • Konrad Grützmann - , ASGEN GmbH & Co KG (Autor:in)
  • Julia Naumann - , Professur für Botanik (Autor:in)
  • Falk Zakrzewski - , ASGEN GmbH & Co KG (Autor:in)
  • Tom Heinekamp - , Julius Kühn Institute - Federal Research Centre for Cultivated Plants (Autor:in)
  • Maria Maglione - , Julius Kühn Institute - Federal Research Centre for Cultivated Plants (Autor:in)
  • Anja Wenke - , Professur für Botanik (Autor:in)
  • Anja Kögler - , Professur für Botanik (Autor:in)
  • Eva Zyprian - , Julius Kühn Institute - Federal Research Centre for Cultivated Plants (Autor:in)
  • Andreas Dahl - , DRESDEN-concept Genome Center (CMCB Core Facility) (Autor:in)
  • Franz Förster - , Technische Universität Dresden (Autor:in)
  • Reinhard Töpfer - , Julius Kühn Institute - Federal Research Centre for Cultivated Plants (Autor:in)
  • Stefan Wanke - , Professur für Botanik, Universidad Nacional Autónoma de México, Senckenberg Gesellschaft für Naturforschung, Johann Wolfgang Goethe-Universität Frankfurt am Main (Autor:in)

Abstract

Veraison marks the transition from berry growth to berry ripening and is a crucial phenological stage in grapevine (Vitis vinifera): the berries become soft and begin to accumulate sugars, aromatic substances, and, in red cultivars, anthocyanins for pigmentation, while the organic acid levels begin to decrease. These changes determine the potential quality of wine. However, rising global temperatures lead to earlier flowering and ripening, which strongly influence wine quality. Here, we combined genotyping-by-sequencing with a bioinformatics pipeline on ∼150 F1 genotypes derived from a cross between the early ripening variety “Calardis Musqué” and the late-ripening variety “Villard Blanc”. Starting from 20,410 haplotype-based markers, we generated a high-density genetic map and performed a quantitative trait locus analysis based on phenotypic datasets evaluated over 20 yrs. Through locus-specific marker enrichment and recombinant screening of ∼1,000 additional genotypes, we refined the originally postulated 5-Mb veraison locus, Ver1, on chromosome 16 to only 112 kb, allowing us to pinpoint the ethylene response factor VviERF027 (VCost.v3 gene ID: Vitvi16g00942, CRIBIv1 gene ID: VIT_16s0100g00400) as veraison candidate gene. Furthermore, the early veraison allele could be traced back to a clonal “Pinot” variant first mentioned in the seventeenth century. “Pinot Precoce Noir” passed this allele over “Madeleine Royale” to the maternal grandparent “Bacchus Weiss” and, ultimately, to the maternal parent “Calardis Musqué”. Our findings are crucial for ripening time control, thereby improving wine quality, and for breeding grapevines adjusted to climate change scenarios that have a major impact on agro-ecosystems in altering crop plant phenology.

Details

OriginalspracheEnglisch
Seiten (von - bis)244-260
Seitenumfang17
FachzeitschriftPlant physiology
Jahrgang196
Ausgabenummer1
PublikationsstatusVeröffentlicht - Sept. 2024
Peer-Review-StatusJa

Externe IDs

PubMed 38743690

Schlagworte

ASJC Scopus Sachgebiete