Biology-inspired visualization of morphogenetic motion in the zebrafish endoderm

Publikation: Beitrag in Buch/Konferenzbericht/Sammelband/GutachtenBeitrag in KonferenzbandBeigetragenBegutachtung

Beitragende

Abstract

Effective visualization of large, multidimensional image data is a key instrument for data exploration in biological and medical applications. We propose a method to visualize motion patterns on a spherical surface, illustrated for the example of the zebrafish embryo. In particular, we analyze cellular motion by integrating prior knowledge about the underlying biological process and show how this improves visualization and connects to the conceptional description of the gastrulation process. We conclude that specialized visualizations are necessary to match data representation with conceptional ideas and to get a more intuitive understanding of the design principles of embryonic tissue formation.

Details

OriginalspracheEnglisch
Titel2016 IEEE International Symposium on Biomedical Imaging
Herausgeber (Verlag)IEEE Computer Society
Seiten925-929
Seitenumfang5
ISBN (elektronisch)9781479923502
PublikationsstatusVeröffentlicht - 15 Juni 2016
Peer-Review-StatusJa

Publikationsreihe

ReiheProceedings - International Symposium on Biomedical Imaging
Band2016-June
ISSN1945-7928

Konferenz

Titel13th IEEE International Symposium on Biomedical Imaging
UntertitelFrom Nano to Macro
KurztitelISBI 2016
Veranstaltungsnummer13
Dauer13 - 16 April 2016
BekanntheitsgradInternationale Veranstaltung
StadtPrague
LandTschechische Republik

Externe IDs

ORCID /0000-0002-2524-1199/work/153110190

Schlagworte

Schlagwörter

  • data visualization, embryogenesis, endoderm, gastrulation, tissue formation, zebrafish