Biobeam-Multiplexed wave-optical simulations of light-sheet microscopy
Publikation: Beitrag in Fachzeitschrift › Forschungsartikel › Beigetragen › Begutachtung
Beitragende
Abstract
Sample-induced image-degradation remains an intricate wave-optical problem in light-sheet microscopy. Here we present biobeam, an open-source software package that enables simulation of operational light-sheet microscopes by combining data from 105-106 multiplexed and GPU-accelerated point-spread-function calculations. The wave-optical nature of these simulations leads to the faithful reproduction of spatially varying aberrations, diffraction artifacts, geometric image distortions, adaptive optics, and emergent wave-optical phenomena, and renders image-formation in light-sheet microscopy computationally tractable.
Details
| Originalsprache | Englisch |
|---|---|
| Aufsatznummer | e1006079 |
| Fachzeitschrift | PLOS computational biology |
| Jahrgang | 14 |
| Ausgabenummer | 4 |
| Publikationsstatus | Veröffentlicht - Apr. 2018 |
| Peer-Review-Status | Ja |
Externe IDs
| PubMedCentral | PMC5898703 |
|---|---|
| Scopus | 85046360092 |
| ORCID | /0000-0002-7780-9057/work/176863465 |
Schlagworte
Schlagwörter
- Computational Biology, Computer Simulation, Image Enhancement/methods, Image Processing, Computer-Assisted/methods, Imaging, Three-Dimensional/methods, Light, Microscopy, Fluorescence/methods, Optical Phenomena, Scattering, Radiation, Software