A window-based time series feature extraction method

Publikation: Beitrag in FachzeitschriftForschungsartikelBeigetragenBegutachtung

Beitragende

  • Deniz Katircioglu-Öztürk - , Middle East Technical University (Autor:in)
  • H. Altay Güvenir - , Bilkent University (Autor:in)
  • Ursula Ravens - , Technische Universität Dresden, Universitätsklinikum Freiburg (Autor:in)
  • Nazife Baykal - , Middle East Technical University (Autor:in)

Abstract

This study proposes a robust similarity score-based time series feature extraction method that is termed as Window-based Time series Feature ExtraCtion (WTC). Specifically, WTC generates domain-interpretable results and involves significantly low computational complexity thereby rendering itself useful for densely sampled and populated time series datasets. In this study, WTC is applied to a proprietary action potential (AP) time series dataset on human cardiomyocytes and three precordial leads from a publicly available electrocardiogram (ECG) dataset. This is followed by comparing WTC in terms of predictive accuracy and computational complexity with shapelet transform and fast shapelet transform (which constitutes an accelerated variant of the shapelet transform). The results indicate that WTC achieves a slightly higher classification performance with significantly lower execution time when compared to its shapelet-based alternatives. With respect to its interpretable features, WTC has a potential to enable medical experts to explore definitive common trends in novel datasets.

Details

OriginalspracheEnglisch
Seiten (von - bis)466-486
Seitenumfang21
FachzeitschriftComputers in biology and medicine
Jahrgang89
PublikationsstatusVeröffentlicht - 1 Okt. 2017
Peer-Review-StatusJa

Externe IDs

PubMed 28886483

Schlagworte

Schlagwörter

  • Atrial fibrillation, Cardiac action potential, Electrocardiography, Feature extraction, Myocardial infarction, Time series analysis