Protein Domains of GTPases on Membranes: Do They Rely on Turings Mechanism?

Publikation: Beitrag in Buch/Konferenzbericht/Sammelband/GutachtenBeitrag in Buch/Sammelband/GutachtenBeigetragenBegutachtung

Beitragende

Abstract

We evaluate different mechanisms for spatial domain formation of guanosine triphosphatases (GTPases) on cellular membranes. A kinetic model of the basic guanine-nucleotide cycle common to all GTPases is developed and coupled along a one-dimensional axis by diffusion of inactive and activated GTPases. We ask whether a parameter set exists such that domain formation is possible by Turing’s mechanism, i.e., purely by reactions and diffusion, and show that the Turing instability does not occur in this model for any parameter combination. But, as revealed by stability and bifurcation analysis, domain formation is reproduced after augmenting the model with combinations of two spatial interaction mechanisms: 1. attraction and 2. adhesion among active GTPases. These interactions can be mediated by effector proteins that bind active GTPases, and the model therefore predicts domains to disintegrate if effector binding is inhibited.

Details

OriginalspracheEnglisch
TitelMathematical Modeling of Biological Systems
Redakteure/-innenAndreas Deutsch, Lutz Brusch, Helen Byrne, Gerda de Vries, Hanspeter Herzel
ErscheinungsortBoston
Herausgeber (Verlag)Birkhauser Boston
Seiten35-48
Seitenumfang14
BandVolume I
AuflageNeuerscheinung
PublikationsstatusVeröffentlicht - 2006
Peer-Review-StatusJa

Publikationsreihe

ReiheModeling and Simulation in Science, Engineering and Technology (MSSET)

Externe IDs

researchoutputwizard legacy.publication#10169
Scopus 85028025922
ORCID /0000-0003-0137-5106/work/142244195