Extracytoplasmic Function σ Factors Can Be Implemented as Robust Heterologous Genetic Switches in Bacillus subtilis

Publikation: Beitrag in FachzeitschriftForschungsartikelBeigetragenBegutachtung

Beitragende

  • Daniela Pinto - , Institut für Mikrobiologie, Technische Universität Dresden (Autor:in)
  • Franziska Dürr - , Institut für Mikrobiologie, Technische Universität Dresden (Autor:in)
  • Friederike Froriep - , Ludwig-Maximilians-Universität München (LMU) (Autor:in)
  • Dayane Araújo - , Ludwig-Maximilians-Universität München (LMU) (Autor:in)
  • Qiang Liu - , Ludwig-Maximilians-Universität München (LMU) (Autor:in)
  • Thorsten Mascher - , Institut für Mikrobiologie, Technische Universität Dresden (Autor:in)

Abstract

In bacteria, the promoter specificity of RNA polymerase is determined by interchangeable σ subunits. Extracytoplasmic function σ factors (ECFs) form the largest and most diverse family of alternative σ factors, and their suitability for constructing genetic switches and circuits was already demonstrated. However, a systematic study on how genetically determined perturbations affect the behavior of these switches is still lacking, which impairs our ability to predict their behavior in complex circuitry. Here, we implemented four ECF switches in Bacillus subtilis and comprehensively characterized their robustness toward genetic perturbations, including changes in copy number, protein stability, or antisense transcription. All switches show characteristic dose-response behavior that varies depending on the individual ECF-promoter pair. Most perturbations had performance costs. Although some general design rules could be derived, a detailed characterization of each ECF switch before implementation is recommended to understand and thereby accommodate its individual behavior.

Details

OriginalspracheEnglisch
Seiten (von - bis)380-390
Seitenumfang11
FachzeitschriftiScience
Jahrgang13
PublikationsstatusVeröffentlicht - 29 März 2019
Peer-Review-StatusJa

Externe IDs

PubMedCentral PMC6426705
Scopus 85066291392

Schlagworte

Bibliotheksschlagworte