Chemical reactions regulated by phase-separated condensates

Publikation: Beitrag in FachzeitschriftForschungsartikelBeigetragenBegutachtung

Beitragende

  • Sudarshana Laha - , Max-Planck-Institut für Physik komplexer Systeme, Zentrum für Systembiologie Dresden (CSBD) (Autor:in)
  • Jonathan Bauermann - , Max-Planck-Institut für Physik komplexer Systeme, Zentrum für Systembiologie Dresden (CSBD) (Autor:in)
  • Frank Jülicher - , Max-Planck-Institut für Physik komplexer Systeme, Zentrum für Systembiologie Dresden (CSBD), Technische Universität Dresden, Exzellenzcluster PoL: Physik des Lebens (Autor:in)
  • Thomas C.T. Michaels - , ETH Zurich (Autor:in)
  • Christoph A. Weber - , Universität Augsburg (Autor:in)

Abstract

Phase-separated liquid condensates can spatially organize and thereby regulate chemical processes. However, the physicochemical mechanisms underlying such regulation remain elusive as the intramolecular interactions responsible for phase separation give rise to a coupling between diffusion and chemical reactions at nondilute conditions. Here, we derive a theoretical framework that decouples the phase separation of scaffold molecules from the reaction kinetics of diluted clients. As a result, phase volume and client partitioning coefficients become control parameters, which enables us to dissect the impact of phase-separated condensates on chemical reactions. We apply this framework to two chemical processes and show how condensates affect the yield of reversible chemical reactions and the initial rate of a simple assembly process. In both cases, we find an optimal condensate volume at which the respective chemical reaction property is maximal. Our work can be applied to experimentally quantify how condensed phases alter chemical processes in systems biology and unravel the mechanisms of how biomolecular condensates regulate biochemistry in living cells.

Details

OriginalspracheEnglisch
Aufsatznummer043092
FachzeitschriftPhysical Review Research
Jahrgang6
Ausgabenummer4
PublikationsstatusVeröffentlicht - Okt. 2024
Peer-Review-StatusJa

Schlagworte

ASJC Scopus Sachgebiete