Cellular dynamics of Ku: Characterization and purification of Ku-eGFP

Publikation: Beitrag in FachzeitschriftForschungsartikelBeigetragenBegutachtung

Beitragende

  • Dennis Merkle - (Autor:in)
  • Dan Zheng - (Autor:in)
  • Thomas Ohrt - , Technische Universität Dresden (Autor:in)
  • Karin Crell - , Technische Universität Dresden (Autor:in)
  • Petra Schwille - , Technische Universität Dresden (Autor:in)

Abstract

Ku is a predominantly nuclear protein that functions as a DNA double-strand-break (DSB) binding protein and regulatory subunit of the DNA-dependent protein kinase (DNA-PK). DNA-PK is involved in synapsis and remodeling of broken DNA ends during nonhomologous end-joining (NHEJ) of DNA DSBs. It has also recently been demonstrated that Ku plays roles in cytoplasmic and membrane processes, namely: interaction with matrix metalloproteinase 9, acting as a co-receptor for parvoviral infection, and also interacting with cell polarity protein, Par3. We present a method for creating stable expression of Ku-eGFP in CHO cells and extend the procedure to purify Ku-eGFP for in vitro assaying. We demonstrated that Ku-eGFP localizes to the nucleus of HeLa cells upon microinjection into the cytoplasm as well as localizing to laser induced DNA damage. We also characterized the diffusional dynamics of Ku in the nucleus and in the cytoplasm using fluorescence correlation spectroscopy (FCS). The FCS data suggest that whereas the majority of Ku (70%) in the nucleus is mobile and freely diffusing, in a cellular context, there also exists a significant slow process fraction (30 %). Strikingly, in the cytoplasm, this immobile/slow moving fraction is even more pronounced (45 %).

Details

OriginalspracheEnglisch
Seiten (von - bis)1251-1259
Seitenumfang9
FachzeitschriftChemBioChem
Jahrgang9
Ausgabenummer8
PublikationsstatusVeröffentlicht - 23 Mai 2008
Peer-Review-StatusJa
Extern publiziertJa

Externe IDs

PubMed 18435448

Schlagworte

Schlagwörter

  • DNA double-strand-break repair, DNA-PK, Fluorescence correlation spectroscopy, Ku heterodimer, Nonhomologous end-joining